Update expression to access male PE/SR stats for male-only chrX events (

#242)
broadinstitute · Oct 14, 2021 · 12be8a7 · 12be8a7
1 parent 6e99475
commit 12be8a7
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/wdl/PETestChromosome.wdl b/wdl/PETestChromosome.wdl
@@ -80,7 +80,7 @@ workflow PETestChromosome {
           chrom = chrom,
           sv_pipeline_docker = sv_pipeline_docker,
           runtime_attr_override = runtime_attr_merge_allo,
-          male_only_expr = "females.log_pval.isnull()"
+          male_only_expr = "females.log_pval == 0"
       }
     }
     if (!allosome) {

diff --git a/wdl/SRTestChromosome.wdl b/wdl/SRTestChromosome.wdl
@@ -81,7 +81,7 @@ workflow SRTestChromosome {
           chrom = chrom,
           runtime_attr_override = runtime_attr_merge_allo,
           sv_pipeline_docker = sv_pipeline_docker,
-          male_only_expr = "females.log_pval.isnull()"
+          male_only_expr = "females.log_pval == 0"
       }
     }