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Add a link to cromwell configuration file.
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VJalili committed Jun 12, 2024
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Expand Up @@ -72,7 +72,9 @@ This section only applies to the single-sample mode.
New reference panels can be generated from a single run of the
`GATKSVPipelineBatch` workflow.
If using a Cromwell server, we recommend copying the outputs to a
permanent location by adding the following option to the workflow configuration file:
permanent location by adding the following option to the
[workflow configuration](https://cromwell.readthedocs.io/en/latest/wf_options/Overview/)
file:

```json
"final_workflow_outputs_dir" : "gs://my-outputs-bucket",
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