Minor formatting update

broadinstitute · Jan 6, 2025 · aba4ba4 · aba4ba4
1 parent ed60fc0
commit aba4ba4
Showing 1 changed file with 6 additions and 0 deletions.
diff --git a/src/svtk/svtk/standardize/std_dragen.py b/src/svtk/svtk/standardize/std_dragen.py
@@ -23,11 +23,17 @@ def standardize_records(self):
 
         mate_IDs = deque()
         for record in self.filter_raw_vcf():
+            # Filter unmarked SECONDARY on same chromosome
             if 'MATEID' in record.info:
                 mate_ID = record.info['MATEID'][0]
+
+                # Skip records with an observed mate
                 if mate_ID in mate_IDs:
                     continue
+
+                # Track IDs of observed records
                 mate_IDs.append(record.id)
+
             yield self.standardize_record(record)
 
     def standardize_info(self, std_rec, raw_rec):