Update VCFs in AnnotateVcf test JSON

[epiercehoffman]

Updates

Generated a new clean VCF from MakeCohortVcf with test_large data and added to test_large input_values JSON. Use this VCF and index file as inputs to AnnotateVcf test JSON in place of an internal dataset.

• Note that a new clean VCF was needed because the baseline_cleaned_vcf contained MCNV records which broke AnnotateVcf.
• Note that the number of JSONs to validate is reduced to 42 from 43 after this change, because an AnnotateVcf JSON is only created for test_large, not test_small, which doesn't have a clean_vcf attribute.

Testing

• Validated all WDLs and JSONs
• AnnotateVcf.wdl ran successfully with the new input files

[mwalker174]

While you're in there, can you move everything from gs://talkowskicromwellresults into gs://gatk-sv-resources?

[epiercehoffman]

I moved the cohort depth and PESR test_large VCFs, and the other files were former inputs to RegenotypeCNVs/Module04b so I just deleted them from the test_large input values JSON. I didn't clean out the gs://talkowskicromwellresults bucket itself though because there's a lot of stuff in there.

*Edit: Re-ran womtool validation after latest commit & it was successful