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Incorporate timing and optimization flags of EH #276

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merged 1 commit into from
Jan 4, 2022

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@VJalili VJalili commented Jan 3, 2022

EH v.5 has two new flags, --record-timing and --cache-mates, which respectively report a breakdown on the runtime of every EH step per target STR site, and make caching optimizations. We use both of these flags for EH dev.

@VJalili VJalili requested a review from mwalker174 January 3, 2022 22:00
@VJalili VJalili merged commit cdacb69 into broadinstitute:master Jan 4, 2022
@VJalili VJalili deleted the eh_copy_stdout branch January 4, 2022 17:41
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