Replace sv_pipeline_rdtest_docker with sv_pipeline_docker.
#645
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very happy this is being addressed |
mwalker174
approved these changes
Apr 29, 2024
# Conflicts: # inputs/values/dockers.json # inputs/values/dockers_azure.json # wdl/GATKSVPipelineBatch.wdl # wdl/GATKSVPipelineSingleSample.wdl # wdl/GenotypeComplexVariants.wdl # wdl/MakeCohortVcf.wdl # wdl/ScatterCpxGenotyping.wdl
VJalili
commented
Apr 30, 2024
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A follow-up from #633, similar to #634 and #639.
This PR improves input definition by collapsing identical inputs defined by different variables and decreasing the number of inputs the workflows take. Specifically, it implements the following changes:
sv_pipeline_rdtest_dockerwithsv_pipeline_docker; and,sv_pipeline_rdtest_dockerifsv_pipeline_dockeris also among the inputs to the workflow.