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v0.24-beta

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@epiercehoffman epiercehoffman released this 28 Jul 15:49
v0.24-beta
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Learn about vigilant mode.

Updates include:

  • ExpansionHunter: Improvements on scaling the EH WDL to more batches, Convert EH JSON to TSV
  • Docker build: Decrease disk usage building dockers on GitHub, Build STR docker image using the build_docker script, Decrease docker count, Enable docker build on m1 macs
  • svtk vcfcluster: Bug fixes, Performance optimization, Fix STRANDS and EV related errors
  • Add GqRecalibrator WDLs and input templates
  • Early BAF generation from CRAMs
  • Switch to new CondenseDepthEvidence GATK tool
  • Run the 5 subworkflows of MakeCohortVcf as separate steps in Terra
  • Integrate GATK SVCluster into ClusterBatch
  • Handle low PE cutoff in genotyping

Full Changelog: v0.23-beta...v0.24-beta

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