Bring in some performance improvements from genomicsdb #5034

Job	Run time
check if the environment has privileges	1s
build and push gatk docker to artifacts	12m 9s
Validate generated WDLs using womtools	14m 46s
Validate script WDLs using womtools	3m 21s
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell	24m 17s
WDL test RUN_CNV_GERMLINE_CASE_WDL on cromwell	27m 0s
WDL test RUN_CNV_SOMATIC_WDL on cromwell	25m 19s
WDL test RUN_M2_WDL on cromwell	16m 32s
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell	13m 24s
Java 17.0.6+10 build and test cloud	18m 45s
Java 17.0.6+10 build and test integration	29m 10s
Java 17.0.6+10 build and test unit	18m 40s
Java 17.0.6+10 test on docker integration	32m 19s
Java 17.0.6+10 test on docker unit	21m 2s
Java 17.0.6+10 test on docker variantcalling	26m 45s
Java 17.0.6+10 test on docker conda	24m 40s
	5h 8m 10s

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