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Port of nvscorevariants into GATK, with a basic tool frontend #8004

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Oct 17, 2024
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The --random-seed argument should be explicitly marked optional
droazen committed Oct 16, 2024

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commit 9481393ae2552218f52220e53475fab61d1c730b
Original file line number Diff line number Diff line change
@@ -98,7 +98,7 @@ public enum TensorType {
@Argument(fullName = "batch-size", doc = "Batch size", optional = true)
private int batchSize = 64;

@Argument(fullName = "random-seed", doc = "Seed to initialize the random number generator")
@Argument(fullName = "random-seed", doc = "Seed to initialize the random number generator", optional = true)
private int randomSeed = 724;

@Argument(fullName = "tmp-file", doc = "The temporary VCF-like file where variants scores will be written", optional = true)