Debugging

broadinstitute · Jun 16, 2024 · 0ca2abe · 0ca2abe
1 parent f3e6345
commit 0ca2abe
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Showing 2 changed files with 9 additions and 9 deletions.
diff --git a/Cargo.lock b/Cargo.lock
diff --git a/go.sh b/go.sh
@@ -4,12 +4,12 @@ set -euxo pipefail
 
 cargo build --release
 
-./target/release/hidive fetch \
-	-l chr6:29,940,532-29,947,870 \
-	-o HLA-A.fasta \
-	gs://fc-bb12940d-f7ba-4515-8a98-42de84f63c34/HPRC_grch38/PBCCSWholeGenome/HG002/alignments/HG002.bam \
-	gs://fc-bb12940d-f7ba-4515-8a98-42de84f63c34/HPRC_grch38/PBCCSWholeGenome/HG00438/alignments/HG00438.bam \
-	gs://fc-bb12940d-f7ba-4515-8a98-42de84f63c34/HPRC_grch38/PBCCSWholeGenome/HG02559/alignments/HG02559.bam \
-	gs://broad-dsde-methods-long-reads/resources/references/grch38_noalt/GCA_000001405.15_GRCh38_no_alt_analysis_set.fa
+#./target/release/hidive fetch \
+#	-l chr6:29,940,532-29,947,870 \
+#	-o HLA-A.fasta \
+#	gs://fc-bb12940d-f7ba-4515-8a98-42de84f63c34/HPRC_grch38/PBCCSWholeGenome/HG002/alignments/HG002.bam \
+#	gs://fc-bb12940d-f7ba-4515-8a98-42de84f63c34/HPRC_grch38/PBCCSWholeGenome/HG00438/alignments/HG00438.bam \
+#	gs://fc-bb12940d-f7ba-4515-8a98-42de84f63c34/HPRC_grch38/PBCCSWholeGenome/HG02559/alignments/HG02559.bam \
+#	gs://broad-dsde-methods-long-reads/resources/references/grch38_noalt/GCA_000001405.15_GRCh38_no_alt_analysis_set.fa
 
 ./target/release/hidive build -r GCA_000001405.15_GRCh38_no_alt_analysis_set -o HLA-A.gfa HLA-A.fasta