Skip to content
View charlesfoster's full-sized avatar

Block or report charlesfoster

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse

Popular repositories Loading

  1. ont-analysis-toolkit ont-analysis-toolkit Public

    A toolkit for monitoring ONT MinION sequencing, followed by data analysis, for viral genomes amplified with tiled amplicon sequencing.

    Python 6

  2. covid-illumina-snakemake covid-illumina-snakemake Public

    Pipeline written in snakemake to analyse SARS-CoV-2 Illumina data

    Python 4 1

  3. pairwise_comparisons pairwise_comparisons Public

    A simple python3 program to compare aligned DNA/protein sequences.

    Python 2 1

  4. mitowrap mitowrap Public

    A snakemake pipeline wrapping MitoZ and getOrganelle for de novo mitogenome assembly using short reads and subsequent QC.

    Python 1 1

  5. vartracker vartracker Public

    vartracker: track the persistence (or not) or mutations during longitudinal sequencing

    Python 1

  6. useful_scripts useful_scripts Public

    Scripts that have proved useful to me

    R