Evaluation notebooks from Rafal Urbaniak #576
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… specific interventions (#563) * Adding fixed interventions as input to `optimize` * Update optimize_interface.ipynb * Adding integration utility to combine interventions * Adding deepcopy for fixed interventions * Update intervention_builder.py * Sw output (#565) * simplify intervention splicing * lint * removed test --------- Co-authored-by: Sam Witty <[email protected]> * Update optimize_interface.ipynb * Adding tests for using fixed intervention with optimize * Simplify interchange dictionary processing (#564) (#566) * simplify intervention splicing * lint * removed test Co-authored-by: Sam Witty <[email protected]> * Update test_interfaces.py * updating name for combining interventions * Update ouu.py * lint * update tests to use new name for combining interventions * lint * Update optimize_interface.ipynb --------- Co-authored-by: Sam Witty <[email protected]>
* set the minimum value of the NormalNoiseModel variance * lint * mixed up minimum and maximum * real lint
* Add ensemble output formatting * Adding support for cumulative states * Updated CDC reformatting * using deepcopy to avoid overwriting results * linting * Lint * fix time unit issue in cdc formatting * updated defaults * Lint * Update result_processing.py * update for time_unit * Update result_processing.py * Update result_processing.py * Update result_processing.py * lint * update tests to match output from `convert_to_output_format` * Update result_processing.py * Update result_processing.py * Update result_processing.py * Update result_processing.py * Update result_processing.py * Update interfaces.py * update alpha_qs type to Sized * updating alpha_qs type to List * Update result_processing.py * Update result_processing.py * lint * fix warning * Update interfaces.ipynb * Dropping all other states/observables except the ones in `solution_string_mapping` * Updating logging_times to include start_time and end_time in ensemble_sample * Updating how to set train_end_point * lint * Update interfaces.ipynb * Update interfaces.ipynb * fixed failing tests (#571) * Update interfaces.ipynb * Fixing tests with expanded timespan * Lint * resolved viz test time misalignment (#573) * Removing commented out code; update documentation for ensemble_sample * replaced DEFAULT_ALPHA_QS with import * lint --------- Co-authored-by: Sam Witty <[email protected]>
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Will move these notebooks to the github.com/darpa-askem/program-milestones 18-month eval. |
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