default blocked DOF support to off for 0.9.2 release

NEWS

@@ -1,12 +1,15 @@
 0.9.1 -> 0.9.2
   * PETSc 3.4 support
   * PETSc BAIJ matrix support for blocked matrices
+    * opt-in for this with './configure --enable-blocked-storage ...'
+    * may cause issues with preallocation in Reduced Basis code -
+      see http://sourceforge.net/mailarchive/forum.php?thread_name=B4613A7D-0033-43C7-A9DF-5A801217A097%40nasa.gov&forum_name=libmesh-devel
   * Refreshed packaged METIS and ParMETIS to latest versions
   * Experimental support for DGFEMContext
   * New accessor API for FEMContext objects. Public members deprecated.
   * Assorted bugfixes:
     * for nonstandard index sizes
-  
+
 0.9.0 -> 0.9.1
   * Multi-communicator-capable objects
     * Communicator-using ParallelObject subclasses can be initialized
@@ -28,7 +31,7 @@
   * Complex-valued libMesh builds can new read real-valued restarts
   * Interface to and contrib copy of Eigen linear algebra package
   * Interface to and contrib copy of newer Nemesis/ExodusII/NetCDF
-  * build Tecplot binary I/O library from source, 
+  * build Tecplot binary I/O library from source,
     * old behavior can be restored via --disable-tecio --enable-tecplot
   * Assorted bugfixes:
     * UnsteadySolver is now more robust inside AMR loops
@@ -76,8 +79,8 @@
      o fem_system_ex2: Nonlinear elasticity, courtesy Robert Weidlich.
      o adjoints_ex5: Unsteady Adjoints.
      o miscellaneous_ex8: meshfree, inverse distance interpolation.
-       
-    
+
+
 0.7.3 -> 0.8.0
   * Vector-valued finite elements & related examples
   * Entirely refactored Parallel namespace implementation
@@ -109,7 +112,7 @@
      o reduced_basis_ex5: 3D linear elasticity with the Reduced Basis method
      o reduced_basis_ex6: Empirical interpolation method for a geometrically parametrized domain in 3D
      o reduced_basis_ex7: Complex-valued Reduced Basis problem modeling an acoustic horn
-  
+
 
 0.7.2 -> 0.7.3
   * Templated FunctionBase and subclass functors

configure

@@ -1,7 +1,7 @@
 #! /bin/sh
 # From configure.ac Revision.
 # Guess values for system-dependent variables and create Makefiles.
-# Generated by GNU Autoconf 2.69 for libmesh 0.9.2-rc1.
+# Generated by GNU Autoconf 2.69 for libmesh 0.9.2.
 #
 # Report bugs to <[email protected]>.
 #
@@ -591,8 +591,8 @@ MAKEFLAGS=
 # Identity of this package.
 PACKAGE_NAME='libmesh'
 PACKAGE_TARNAME='libmesh'
-PACKAGE_VERSION='0.9.2-rc1'
-PACKAGE_STRING='libmesh 0.9.2-rc1'
+PACKAGE_VERSION='0.9.2'
+PACKAGE_STRING='libmesh 0.9.2'
 PACKAGE_BUGREPORT='[email protected]'
 PACKAGE_URL='http://libmesh.sourceforge.net'
 
@@ -1699,7 +1699,7 @@ if test "$ac_init_help" = "long"; then
   # Omit some internal or obsolete options to make the list less imposing.
   # This message is too long to be a string in the A/UX 3.1 sh.
   cat <<_ACEOF
-\`configure' configures libmesh 0.9.2-rc1 to adapt to many kinds of systems.
+\`configure' configures libmesh 0.9.2 to adapt to many kinds of systems.
 
 Usage: $0 [OPTION]... [VAR=VALUE]...
 
@@ -1770,7 +1770,7 @@ fi
 
 if test -n "$ac_init_help"; then
   case $ac_init_help in
-     short | recursive ) echo "Configuration of libmesh 0.9.2-rc1:";;
+     short | recursive ) echo "Configuration of libmesh 0.9.2:";;
    esac
   cat <<\_ACEOF
 
@@ -2045,7 +2045,7 @@ fi
 test -n "$ac_init_help" && exit $ac_status
 if $ac_init_version; then
   cat <<\_ACEOF
-libmesh configure 0.9.2-rc1
+libmesh configure 0.9.2
 generated by GNU Autoconf 2.69
 
 Copyright (C) 2012 Free Software Foundation, Inc.
@@ -3117,7 +3117,7 @@ cat >config.log <<_ACEOF
 This file contains any messages produced by compilers while
 running configure, to aid debugging if configure makes a mistake.
 
-It was created by libmesh $as_me 0.9.2-rc1, which was
+It was created by libmesh $as_me 0.9.2, which was
 generated by GNU Autoconf 2.69.  Invocation command line was
 
   $ $0 $@
@@ -4110,7 +4110,7 @@ fi
 
 # Define the identity of the package.
  PACKAGE='libmesh'
- VERSION='0.9.2-rc1'
+ VERSION='0.9.2'
 
 
 cat >>confdefs.h <<_ACEOF
@@ -26370,13 +26370,14 @@ $as_echo "---------------------------------------------" >&6; }
 
 
 # --------------------------------------------------------------
-# blocked matrix/vector storage - enabled by default
+# blocked matrix/vector storage - disabled by default.
+#   See http://sourceforge.net/mailarchive/forum.php?thread_name=B4613A7D-0033-43C7-A9DF-5A801217A097%40nasa.gov&forum_name=libmesh-devel
 # --------------------------------------------------------------
 # Check whether --enable-blocked-storage was given.
 if test "${enable_blocked_storage+set}" = set; then :
   enableval=$enable_blocked_storage; enableblockedstorage=$enableval
 else
-  enableblockedstorage=yes
+  enableblockedstorage=no
 fi
 
 
@@ -34069,7 +34070,7 @@ cat >>$CONFIG_STATUS <<\_ACEOF || ac_write_fail=1
 # report actual input values of CONFIG_FILES etc. instead of their
 # values after options handling.
 ac_log="
-This file was extended by libmesh $as_me 0.9.2-rc1, which was
+This file was extended by libmesh $as_me 0.9.2, which was
 generated by GNU Autoconf 2.69.  Invocation command line was
 
   CONFIG_FILES    = $CONFIG_FILES
@@ -34136,7 +34137,7 @@ _ACEOF
 cat >>$CONFIG_STATUS <<_ACEOF || ac_write_fail=1
 ac_cs_config="`$as_echo "$ac_configure_args" | sed 's/^ //; s/[\\""\`\$]/\\\\&/g'`"
 ac_cs_version="\\
-libmesh config.status 0.9.2-rc1
+libmesh config.status 0.9.2
 configured by $0, generated by GNU Autoconf 2.69,
   with options \\"\$ac_cs_config\\"
 

configure.ac

@@ -4,7 +4,7 @@
 
 
 
-AC_INIT([libmesh], [0.9.2-rc1], [[email protected]], [libmesh], [http://libmesh.sourceforge.net])
+AC_INIT([libmesh], [0.9.2], [[email protected]], [libmesh], [http://libmesh.sourceforge.net])
 AC_PREREQ([2.61]) # require autoconf 2.61 - I havent tried anything older
 
 # by default CFLAGS and CXXFLAGS are set to '-g -O2' on systems that support them.

m4/libmesh_core_features.m4

@@ -8,12 +8,13 @@ AC_MSG_RESULT(---------------------------------------------)
 
 
 # --------------------------------------------------------------
-# blocked matrix/vector storage - enabled by default
+# blocked matrix/vector storage - disabled by default.
+#   See http://sourceforge.net/mailarchive/forum.php?thread_name=B4613A7D-0033-43C7-A9DF-5A801217A097%40nasa.gov&forum_name=libmesh-devel
 # --------------------------------------------------------------
 AC_ARG_ENABLE(blocked-storage,
               [AC_HELP_STRING([--enable-blocked-storage],[Support for blocked matrix/vector storage])],
               enableblockedstorage=$enableval,
-              enableblockedstorage=yes)
+              enableblockedstorage=no)
 
 if test "$enableblockedstorage" != no ; then
   AC_MSG_RESULT([<<< Configuring library to use blocked storage data structures >>>])