Chem: removed dependencies from Chembl, ChemblApi and PubChem package… #26723
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| name: Lint | |
| on: | |
| workflow_dispatch: { } | |
| push: | |
| pull_request: | |
| types: [ opened, edited, synchronize, reopened ] | |
| jobs: | |
| common-check: | |
| name: Common checks | |
| uses: ./.github/workflows/common_check.yaml | |
| with: | |
| run_trigger: ${{ github.event_name }} | |
| # super-linter: | |
| # name: Super Lint Code Base | |
| # needs: common-check | |
| # runs-on: ubuntu-22.04 | |
| # if: needs.common-check.outputs.continue == 'true' | |
| # steps: | |
| # - name: Checkout Code | |
| # uses: actions/checkout@v4 | |
| # with: | |
| # # Full git history is needed to get a proper list of changed files within `super-linter` | |
| # fetch-depth: 0 | |
| # - name: Lint Code Base | |
| # uses: github/[email protected] | |
| # env: | |
| # DISABLE_ERRORS: true | |
| # DEFAULT_BRANCH: master | |
| # GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| # MULTI_STATUS: true | |
| # LOG_LEVEL: WARN | |
| # ERROR_ON_MISSING_EXEC_BIT: true | |
| # SUPPRESS_FILE_TYPE_WARN: false | |
| # JSCPD_CONFIG_FILE: .jscpd.json | |
| # NATURAL_LANGUAGE_CONFIG_FILE: .textlintrc | |
| # JAVASCRIPT_ES_CONFIG_FILE: .eslintrc.json | |
| # TYPESCRIPT_ES_CONFIG_FILE: .eslintrc.json | |
| # VALIDATE_ALL_CODEBASE: false | |
| # IGNORE_GITIGNORED_FILES: true | |
| # VALIDATE_BASH: true | |
| # VALIDATE_BASH_EXEC: true | |
| # VALIDATE_CPP: true | |
| # VALIDATE_CLANG_FORMAT: true | |
| # VALIDATE_CLOUDFORMATION: true | |
| # VALIDATE_CSS: true | |
| # VALIDATE_DART: true | |
| # VALIDATE_DOCKERFILE_HADOLINT: true | |
| # VALIDATE_EDITORCONFIG: true | |
| # VALIDATE_GITHUB_ACTIONS: true | |
| # VALIDATE_GITLEAKS: true | |
| # VALIDATE_GOOGLE_JAVA_FORMAT: true | |
| # VALIDATE_HTML: true | |
| # VALIDATE_JAVA: true | |
| # VALIDATE_JAVASCRIPT_ES: true | |
| # VALIDATE_JSON: true | |
| # VALIDATE_JSX: true | |
| # VALIDATE_KUBERNETES_KUBEVAL: true | |
| # VALIDATE_LUA: true | |
| # VALIDATE_NATURAL_LANGUAGE: true | |
| # VALIDATE_POWERSHELL: true | |
| # VALIDATE_SHELL_SHFMT: true | |
| # VALIDATE_TERRAFORM_TERRASCAN: true | |
| # VALIDATE_TERRAFORM_TFLINT: true | |
| # VALIDATE_TSX: true | |
| # VALIDATE_TYPESCRIPT_ES: true | |
| # VALIDATE_XML: true | |
| # VALIDATE_YAML: true | |
| markdown: | |
| name: MarkdownLint | |
| needs: common-check | |
| runs-on: ubuntu-22.04 | |
| if: needs.common-check.outputs.continue == 'true' | |
| permissions: | |
| pull-requests: read | |
| steps: | |
| - name: Set git fetch depth | |
| run: | | |
| if [[ ${{ github.event_name }} != 'pull_request' ]]; then | |
| echo "FETCH_DEPTH=2" >> "$GITHUB_ENV" | |
| else | |
| echo "FETCH_DEPTH=0" >> "$GITHUB_ENV" | |
| fi | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: ${{ env.FETCH_DEPTH }} | |
| - uses: tj-actions/changed-files@v42 | |
| id: changed-files | |
| with: | |
| files: '**/*.{md,mdx}' | |
| separator: "," | |
| - uses: DavidAnson/[email protected] | |
| if: steps.changed-files.outputs.any_changed == 'true' | |
| with: | |
| globs: ${{ steps.changed-files.outputs.all_changed_files }} | |
| separator: "," | |
| fix: true | |
| commit: | |
| name: CommitLint | |
| needs: common-check | |
| runs-on: ubuntu-22.04 | |
| if: needs.common-check.outputs.continue == 'true' | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 2 | |
| - uses: actions/setup-node@v4 | |
| with: | |
| node-version: '18' | |
| - name: Install commitlint dependencies | |
| run: npm install --location=global @commitlint/config-conventional @commitlint/cli | |
| - uses: wagoid/commitlint-github-action@v5 | |
| with: | |
| configFile: commitlint.config.js | |
| failOnWarnings: false | |
| helpURL: https://datagrok.ai/help/develop/dev-process/git-policy#commit-message-policy | |
| pr-name: | |
| name: PR name | |
| runs-on: ubuntu-22.04 | |
| if: github.event_name == 'pull_request' | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 2 | |
| - uses: actions/setup-node@v4 | |
| with: | |
| node-version: '18' | |
| # https://github.com/JulienKode/pull-request-name-linter-action/issues/236 | |
| - name: Install commitlint dependencies | |
| run: npm install @commitlint/config-conventional@v17 @commitlint/cli | |
| - name: Commitlint PR title | |
| uses: JulienKode/[email protected] | |
| with: | |
| configuration-path: ./commitlint.config.js | |
| packages-links: | |
| name: Packages links | |
| runs-on: ubuntu-22.04 | |
| if: github.event_name == 'workflow_dispatch' | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 2 | |
| - name: Check links in packages | |
| shell: bash | |
| continue-on-error: true | |
| timeout-minutes: 15 | |
| id: test-links | |
| run: | | |
| test_result=$(./packages_help.sh) | |
| if [ -z "$test_result" ]; then | |
| echo "All tests finished successfully" | |
| else | |
| echo -e "${test_result}" | |
| echo -e "SLACK_MESSAGE_BODY=${test_result}\n\n" | sed -e '$ ! s/$/\\n/' | tr -d '\n' >> $GITHUB_ENV | |
| exit 1 | |
| fi | |
| working-directory: packages/ | |
| - name: Prepare Slack Message | |
| id: slack-prepare | |
| if: ${{ steps.test-links.outcome == 'failure' }} | |
| shell: bash | |
| env: | |
| SLACK_ID: ${{ secrets.SLACK_ID }} | |
| run: | | |
| channel_id=$(echo "$SLACK_ID" | jq -r .\"${{ github.actor }}\") | |
| echo "::add-mask::$channel_id" | |
| echo SLACK_CHANNEL=$channel_id >> $GITHUB_ENV | |
| header="GitHub <${{ github.server_url }}/${{ github.repository }}/actions/runs/${{ github.run_id }}|${{ github.workflow }} ${{ github.run_number }}> found dangling help links in packages:" | |
| echo SLACK_MESSAGE_HEADER=$header >> $GITHUB_ENV | |
| context="*Branch:* <${{ github.server_url }}/${{ github.repository }}/tree/${{ github.ref_name }}|${{ github.ref_name }}>\n*Commit:* <${{ github.server_url }}/${{ github.repository }}/commit/${{ github.sha }}|$(echo ${{ github.sha }} | cut -c1-8) $(git log --format=%B -n 1 ${{ github.sha }} | head -n1)>" | |
| echo SLACK_MESSAGE_CONTEXT=$context >> $GITHUB_ENV | |
| echo -e "SLACK_MESSAGE_BODY=${SLACK_MESSAGE_BODY}" | sed -e '$ ! s/$/\\n/' -e 's/"/\\"/g' | tr -d '\n' >> $GITHUB_ENV | |
| - name: Send test report to Slack | |
| id: slack | |
| if: ${{ steps.slack-prepare.outcome == 'success' }} | |
| uses: slackapi/[email protected] | |
| with: | |
| channel-id: ${{ env.SLACK_CHANNEL }} | |
| payload: | | |
| { | |
| "blocks": [ | |
| { | |
| "type": "section", | |
| "text": { | |
| "type": "mrkdwn", | |
| "text": "${{ env.SLACK_MESSAGE_HEADER }}" | |
| } | |
| }, | |
| { | |
| "type": "section", | |
| "text": { | |
| "type": "mrkdwn", | |
| "text": "${{ env.SLACK_MESSAGE_BODY }}" | |
| } | |
| }, | |
| { | |
| "type": "context", | |
| "elements": [ | |
| { | |
| "type": "mrkdwn", | |
| "text": "${{ env.SLACK_MESSAGE_CONTEXT }}" | |
| } | |
| ] | |
| } | |
| ] | |
| } | |
| env: | |
| SLACK_BOT_TOKEN: ${{ secrets.SLACKBOT_TOKEN }} |