Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

landing page organism viz (#289) #290

Draft
wants to merge 25 commits into
base: main
Choose a base branch
from
Draft

landing page organism viz (#289) #290

wants to merge 25 commits into from

Conversation

d-callan
Copy link
Collaborator

working our way towards a viz for the landing page. my understanding is that this pr should do the following:

  • provide a summary of what organisms/ assemblies we currently support as a sunburst
  • for segments of the sunburst w ncbi tax ids that match our 'taxonomic group' filter, allow a user to select that segment and go to a filtered organism/ assembly page
  • be pretty lol
  • automagically produce the required data via ncbi api calls

resolves #289

@dannon
Copy link
Member

dannon commented Feb 13, 2025

Here's the current view of it as demo'd in the call today;

image

Right panel is reactive and shows information about the currently selected node. Quick links (organism page, etc.) and other stuff forthcoming, suggestions welcome.

In the screenshot the currently selected node is the root, which won't have relevant info to show. We should instead show some intro text like "Click an area of interest in the visualization to..." etc.

@dannon
Copy link
Member

dannon commented Feb 13, 2025

Note to myself that the 'happy accident' of parent nodes including themselves in the count, causing the organic-looking decreasing arc size is visually interesting but I should fix the count.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

Visualization for heirarchical display of genomes for homepage
2 participants