GitHub - leopoldguyot/BINF-402_Transcriptomic_Project: Source code for the transcriptomic project of the BINF-402 ULB course

leopoldguyot / BINF-402_Transcriptomic_Project Public

Notifications You must be signed in to change notification settings
Fork 0
Star 0

Source code for the transcriptomic project of the BINF-402 ULB course

Notifications

Name		Name	Last commit message	Last commit date
Latest commit History 19 Commits
Figures		Figures
data		data
data_output		data_output
.gitignore		.gitignore
Quality_control_stats.R		Quality_control_stats.R
README.txt		README.txt
differential_expression_analysis.R		differential_expression_analysis.R
main.pdf		main.pdf
main.tex		main.tex
quality_control.R		quality_control.R
reads_mapping.R		reads_mapping.R
references.bib		references.bib
retrieve_data.R		retrieve_data.R

Repository files navigation

This is the code for the BINF-402 Transcriptomic Project. 
The Latex code for the report is also present.

To run the code, please use the following order :

1. retrieve_data.R
2. quality_control.R and Quality_control_stats.R (optional)
3. reads_mapping.R
4. differential_expression_analysis.R