HPC Installation Instructions #127
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Thanks @Andesha - I will definitely give this a swing on Narval this week! Re: documentation, I wonder if we should put this as a dedicated page in our documentation, specifically for CC users, since these directions are specific to compute canada (i.e. other HPC's won't necessarily have a wheel built for mne?). I could do that but it will probably be a while before it gets done. |
| pip install mne_bids | ||
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| # Clone down mne-iclabel and switch to the right version and install it locally | ||
| git clone https://github.com/mne-tools/mne-icalabel.git |
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Out of curiosity - is it necessary to checkout a certain branch of mne-icalabel?
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Just tried out your instructions. Runs on narval like a charm! Even got a 50% speed improvement compared to my local computer. Awesome that we have a wheel for MNE on compute canada now. |
| pip install --no-index pyyaml | ||
| pip install --no-index sklearn | ||
| pip install mne_bids | ||
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the user also needs to pip install edflib-python for full lossless functionality (saving).
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Feel free to make the change or move it into a wiki page or something - any of those sorts of things are fine with me |
Indeed, a specific tutorial page seems a good idea. +1 |
The following is my workflow for getting everything running smoothly in an environment on Narval.
Hopefully addresses #126 and #98 for the time being.