info-file: untrimmed reads do not show

[marcelm]

From [email protected] on October 31, 2014 12:16:45

The info file includes only trimmed reads.

Original issue: http://code.google.com/p/cutadapt/issues/detail?id=85

[marcelm]

From [email protected] on November 05, 2014 04:26:18

Summary: info-file: untrimmed reads do not show (was: info-file: untrimmed reads not show)

[dkoppstein]

I just ran into this issue. I was surprised that the reads weren't there, since the documentation states:

If no adapter was found, the format is as follows:

Read name
The value -1
The read sequence

[marcelm]

You are absolutely right ... I’m just astonished no one else has complained so far! Fixed in Git master.

[dkoppstein]

Thank you! I really like the --info-file feature, thank you for implementing it.