only add edges with distance < 1 to the full network table

big_scape/output/legacy_output.py

@@ -638,6 +638,7 @@ def write_network_file(
         .where(edge_params_table.c.weights.in_(incl_weights))
         .where(edge_params_table.c.alignment_mode == aln_mode)
         .where(edge_params_table.c.extend_strategy == ext_strat)
+        .where(distance_table.c.distance < 1)
     )
 
     if cutoff is not None: