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skip first codon when checking if translation from antismash and biop… #50

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merged 1 commit into from
Aug 31, 2023

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CatarinaCarolina
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tiny hot-fix: only issue warning about mismatched CDS translation given by antismash vs biopython when the mismatch features codons/aas other than the first codon.
This is because antismash/NCBI/EBI have better 'knowledge' of bacterial alternative codons, and current biopython implementation doesnt.

…ython match, cds 1 and 2 from test file are manually altered
@adraismawur adraismawur merged commit 9a6f142 into dev Aug 31, 2023
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@adraismawur adraismawur deleted the hot-fix/cds-translation branch August 31, 2023 14:36
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