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2 changes: 1 addition & 1 deletion _modules/neurokit2/ppg/ppg_quality.html
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Expand Up @@ -504,7 +504,7 @@ <h1>Source code for neurokit2.ppg.ppg_quality</h1><div class="highlight"><pre>

<span class="c1"># Interpolate beat-by-beat CCs</span>
<span class="n">quality</span> <span class="o">=</span> <span class="n">signal_interpolate</span><span class="p">(</span>
<span class="n">ppg_pw_peaks</span><span class="p">[</span><span class="mi">0</span><span class="p">:</span><span class="o">-</span><span class="mi">1</span><span class="p">],</span> <span class="n">cc</span><span class="p">,</span> <span class="n">x_new</span><span class="o">=</span><span class="n">np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="nb">len</span><span class="p">(</span><span class="n">ppg_cleaned</span><span class="p">)),</span> <span class="n">method</span><span class="o">=</span><span class="s2">&quot;quadratic&quot;</span>
<span class="n">ppg_pw_peaks</span><span class="p">[</span><span class="mi">0</span><span class="p">:</span><span class="o">-</span><span class="mi">1</span><span class="p">],</span> <span class="n">cc</span><span class="p">,</span> <span class="n">x_new</span><span class="o">=</span><span class="n">np</span><span class="o">.</span><span class="n">arange</span><span class="p">(</span><span class="nb">len</span><span class="p">(</span><span class="n">ppg_cleaned</span><span class="p">)),</span> <span class="n">method</span><span class="o">=</span><span class="s2">&quot;previous&quot;</span>
<span class="p">)</span>

<span class="k">return</span> <span class="n">quality</span>
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11 changes: 8 additions & 3 deletions examples/bio_custom/bio_custom.html
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Expand Up @@ -452,6 +452,11 @@ <h1>Customize your Processing Pipeline<a class="headerlink" href="#customize-you
</pre></div>
</div>
</div>
<div class="cell_output docutils container">
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>Matplotlib is building the font cache; this may take a moment.
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Expand All @@ -473,7 +478,7 @@ <h2>The Default NeuroKit processing pipeline<a class="headerlink" href="#the-def
</div>
</div>
<div class="cell_output docutils container">
<img alt="../../_images/91eac185f60d0d443bef4fca9d0e15cd599a185af649bc066963a2c3099eca54.png" src="../../_images/91eac185f60d0d443bef4fca9d0e15cd599a185af649bc066963a2c3099eca54.png" />
<img alt="../../_images/d45041bae6ee7d09eab7d3dc44ec2f12bc9ae021b43092576379dd2599a643d5.png" src="../../_images/d45041bae6ee7d09eab7d3dc44ec2f12bc9ae021b43092576379dd2599a643d5.png" />
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</section>
Expand Down Expand Up @@ -521,7 +526,7 @@ <h2>Building your own <code class="docutils literal notranslate"><span class="pr
</div>
</div>
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<img alt="../../_images/c000adf4c00749a1bdd6385a8daf1d280f3422a9bcf5822e8f2b143cd9973b3e.png" src="../../_images/c000adf4c00749a1bdd6385a8daf1d280f3422a9bcf5822e8f2b143cd9973b3e.png" />
<img alt="../../_images/40ea2aec8e49ae408e4d4edcf35cbacebe48007e1da4aedfdcbaabac48fb74f9.png" src="../../_images/40ea2aec8e49ae408e4d4edcf35cbacebe48007e1da4aedfdcbaabac48fb74f9.png" />
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</section>
Expand Down Expand Up @@ -613,7 +618,7 @@ <h2>Customize even more!<a class="headerlink" href="#customize-even-more" title=
</div>
</div>
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<img alt="../../_images/630dbc76770498d1eb523e511a9bb8f62b05a029803adb25ca37eb97caab2953.png" src="../../_images/630dbc76770498d1eb523e511a9bb8f62b05a029803adb25ca37eb97caab2953.png" />
<img alt="../../_images/083bcc6635f3d94d42171629b6349358420f46e1f7ef517b220d52a9d8e7bfeb.png" src="../../_images/083bcc6635f3d94d42171629b6349358420f46e1f7ef517b220d52a9d8e7bfeb.png" />
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<p>This doesn’t look bad :) <strong>Can you do better?</strong></p>
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6 changes: 3 additions & 3 deletions examples/bio_eventrelated/bio_eventrelated.html
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Expand Up @@ -624,11 +624,11 @@ <h2>Manually Extract Event Related Features<a class="headerlink" href="#manually
</div>
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<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>C:\Users\runneradmin\AppData\Local\Temp\ipykernel_4932\4246861920.py:12: FutureWarning: The behavior of obj[i:j] with a float-dtype index is deprecated. In a future version, this will be treated as positional instead of label-based. For label-based slicing, use obj.loc[i:j] instead
<div class="output stderr highlight-myst-ansi notranslate"><div class="highlight"><pre><span></span>C:\Users\runneradmin\AppData\Local\Temp\ipykernel_7016\4246861920.py:12: FutureWarning: The behavior of obj[i:j] with a float-dtype index is deprecated. In a future version, this will be treated as positional instead of label-based. For label-based slicing, use obj.loc[i:j] instead
ecg_mean = epoch[&quot;ECG_Rate&quot;][0:4].mean() # Mean heart rate in the 0-4 seconds
C:\Users\runneradmin\AppData\Local\Temp\ipykernel_4932\4246861920.py:18: FutureWarning: The behavior of obj[i:j] with a float-dtype index is deprecated. In a future version, this will be treated as positional instead of label-based. For label-based slicing, use obj.loc[i:j] instead
C:\Users\runneradmin\AppData\Local\Temp\ipykernel_7016\4246861920.py:18: FutureWarning: The behavior of obj[i:j] with a float-dtype index is deprecated. In a future version, this will be treated as positional instead of label-based. For label-based slicing, use obj.loc[i:j] instead
rsp_rate = epoch[&quot;RSP_Rate&quot;][0:6].mean() # Longer window for RSP that has a slower dynamic
C:\Users\runneradmin\AppData\Local\Temp\ipykernel_4932\4246861920.py:24: FutureWarning: The behavior of obj[i:j] with a float-dtype index is deprecated. In a future version, this will be treated as positional instead of label-based. For label-based slicing, use obj.loc[i:j] instead
C:\Users\runneradmin\AppData\Local\Temp\ipykernel_7016\4246861920.py:24: FutureWarning: The behavior of obj[i:j] with a float-dtype index is deprecated. In a future version, this will be treated as positional instead of label-based. For label-based slicing, use obj.loc[i:j] instead
scr_max = epoch[&quot;SCR_Amplitude&quot;][0:6].max() # Maximum SCR peak
</pre></div>
</div>
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2 changes: 1 addition & 1 deletion examples/bio_intervalrelated/bio_intervalrelated.html
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Expand Up @@ -484,7 +484,7 @@ <h2>Process the Signals<a class="headerlink" href="#process-the-signals" title="
</div>
</div>
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4 changes: 2 additions & 2 deletions examples/ecg_generate_12leads/ecg_generate_12leads.html
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Expand Up @@ -464,7 +464,7 @@ <h2>Normal Multi-lead ECG<a class="headerlink" href="#normal-multi-lead-ecg" tit
</div>
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<img alt="../../_images/08118619703a82600ad0dca00e4e7dc3e23b6a1f3b0bfef74da8a5d41bec02f8.png" src="../../_images/08118619703a82600ad0dca00e4e7dc3e23b6a1f3b0bfef74da8a5d41bec02f8.png" />
<img alt="../../_images/75e0054c30f83ef6f8048295fe5abf5a9f3a016ec9ecd289a7007ba332bf14b8.png" src="../../_images/75e0054c30f83ef6f8048295fe5abf5a9f3a016ec9ecd289a7007ba332bf14b8.png" />
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Expand Down Expand Up @@ -496,7 +496,7 @@ <h2>Abnormal Multi-lead ECG<a class="headerlink" href="#abnormal-multi-lead-ecg"
</div>
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<img alt="../../_images/e1e1ed03111027ac6fcaedc6f34e9abfbaf1875b0b0317c6fac54cda006844b1.png" src="../../_images/e1e1ed03111027ac6fcaedc6f34e9abfbaf1875b0b0317c6fac54cda006844b1.png" />
<img alt="../../_images/d68de0411fdc350ed0f79563a22b92c96b09270adc47d12c3a50d8e93b20b07b.png" src="../../_images/d68de0411fdc350ed0f79563a22b92c96b09270adc47d12c3a50d8e93b20b07b.png" />
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226 changes: 113 additions & 113 deletions examples/ecg_heartbeats/ecg_heartbeats.html
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Expand Up @@ -503,7 +503,7 @@ <h2>Extract R-peaks location<a class="headerlink" href="#extract-r-peaks-locatio
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<img alt="../../_images/bf260b0115258e126956ef2d154f6f62afdacf9e6e368a0cab80404dd94aede6.png" src="../../_images/bf260b0115258e126956ef2d154f6f62afdacf9e6e368a0cab80404dd94aede6.png" />
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<p>Once that we know where the R-peaks are located, we can create windows of signal around them (of a length of for instance 1 second, ranging from 400 ms before the R-peak), which we can refer to as <em>epochs</em>.</p>
Expand All @@ -519,7 +519,7 @@ <h2>Segment the signal around the heart beats<a class="headerlink" href="#segmen
</div>
</div>
<div class="cell_output docutils container">
<img alt="../../_images/84dcd983cc2066d24222a95632a7a01e13bbe86efe7d63800e49115256a45b7e.png" src="../../_images/84dcd983cc2066d24222a95632a7a01e13bbe86efe7d63800e49115256a45b7e.png" />
<img alt="../../_images/f68b1ae8badaa230c677d8b6a171defbdf7a89a6356a5c280649119322c9c7ed.png" src="../../_images/f68b1ae8badaa230c677d8b6a171defbdf7a89a6356a5c280649119322c9c7ed.png" />
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<p>This create a dictionary of dataframes for each ‘epoch’ (in this case, each heart beat).</p>
Expand Down Expand Up @@ -575,36 +575,36 @@ <h3>Custom colors and legend<a class="headerlink" href="#custom-colors-and-legen
<tbody>
<tr>
<th>0</th>
<td>-0.212140</td>
<td>138</td>
<td>-0.199208</td>
<td>139</td>
<td>1</td>
<td>-0.300000</td>
</tr>
<tr>
<th>1</th>
<td>-0.206626</td>
<td>139</td>
<td>-0.193613</td>
<td>140</td>
<td>1</td>
<td>-0.295977</td>
</tr>
<tr>
<th>2</th>
<td>-0.200993</td>
<td>140</td>
<td>-0.187926</td>
<td>141</td>
<td>1</td>
<td>-0.291954</td>
</tr>
<tr>
<th>3</th>
<td>-0.195175</td>
<td>141</td>
<td>-0.182081</td>
<td>142</td>
<td>1</td>
<td>-0.287931</td>
</tr>
<tr>
<th>4</th>
<td>-0.189090</td>
<td>142</td>
<td>-0.175999</td>
<td>143</td>
<td>1</td>
<td>-0.283908</td>
</tr>
Expand Down Expand Up @@ -689,123 +689,123 @@ <h3>Custom colors and legend<a class="headerlink" href="#custom-colors-and-legen
<tbody>
<tr>
<th>-0.300000</th>
<td>-0.212140</td>
<td>-0.141319</td>
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<td>-0.133170</td>
<td>-0.141418</td>
<td>-0.145981</td>
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<td>-0.199208</td>
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<td>-0.129525</td>
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<td>-0.129888</td>
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<td>-0.130976</td>
<td>-0.139447</td>
<td>-0.138952</td>
<td>-0.130836</td>
<td>...</td>
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<td>-0.119732</td>
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<td>-0.141850</td>
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<td>-0.131562</td>
<td>-0.152707</td>
<td>-0.053897</td>
<td>-0.273898</td>
<td>-0.113680</td>
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<td>-0.134306</td>
<td>-0.142873</td>
<td>-0.134914</td>
<td>-0.136157</td>
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<th>-0.295977</th>
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<td>-0.139908</td>
<td>-0.132209</td>
<td>-0.140346</td>
<td>-0.145014</td>
<td>-0.138435</td>
<td>-0.134515</td>
<td>-0.133606</td>
<td>-0.193613</td>
<td>-0.127465</td>
<td>-0.128601</td>
<td>-0.138569</td>
<td>-0.129185</td>
<td>-0.131162</td>
<td>-0.129803</td>
<td>-0.138179</td>
<td>-0.137965</td>
<td>-0.130236</td>
<td>...</td>
<td>-0.135043</td>
<td>-0.148101</td>
<td>-0.119237</td>
<td>-0.152413</td>
<td>-0.119051</td>
<td>-0.146785</td>
<td>-0.134088</td>
<td>-0.140591</td>
<td>-0.143890</td>
<td>-0.138054</td>
<td>-0.131041</td>
<td>-0.151701</td>
<td>-0.053160</td>
<td>-0.273432</td>
<td>-0.112118</td>
<td>-0.139197</td>
<td>-0.132963</td>
<td>-0.142050</td>
<td>-0.134162</td>
<td>-0.135380</td>
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<tr>
<th>-0.291954</th>
<td>-0.200993</td>
<td>-0.140192</td>
<td>-0.134545</td>
<td>-0.138712</td>
<td>-0.131054</td>
<td>-0.139041</td>
<td>-0.143897</td>
<td>-0.137311</td>
<td>-0.133316</td>
<td>-0.132261</td>
<td>-0.187926</td>
<td>-0.126436</td>
<td>-0.127544</td>
<td>-0.137772</td>
<td>-0.128347</td>
<td>-0.130282</td>
<td>-0.128476</td>
<td>-0.136708</td>
<td>-0.136792</td>
<td>-0.129491</td>
<td>...</td>
<td>-0.134187</td>
<td>-0.146860</td>
<td>-0.117789</td>
<td>-0.151962</td>
<td>-0.118215</td>
<td>-0.145654</td>
<td>-0.132565</td>
<td>-0.139173</td>
<td>-0.142734</td>
<td>-0.136995</td>
<td>-0.130466</td>
<td>-0.150573</td>
<td>-0.052267</td>
<td>-0.272740</td>
<td>-0.110391</td>
<td>-0.138258</td>
<td>-0.131470</td>
<td>-0.140981</td>
<td>-0.133278</td>
<td>-0.134454</td>
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<tr>
<th>-0.287931</th>
<td>-0.195175</td>
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<td>-0.137313</td>
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<td>-0.137466</td>
<td>-0.142581</td>
<td>-0.136067</td>
<td>-0.131913</td>
<td>-0.130753</td>
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<td>-0.125265</td>
<td>-0.126309</td>
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<td>-0.127317</td>
<td>-0.129188</td>
<td>-0.126949</td>
<td>-0.134962</td>
<td>-0.135391</td>
<td>-0.128563</td>
<td>...</td>
<td>-0.133088</td>
<td>-0.145447</td>
<td>-0.116169</td>
<td>-0.151374</td>
<td>-0.117201</td>
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<td>-0.130811</td>
<td>-0.137542</td>
<td>-0.141398</td>
<td>-0.135721</td>
<td>-0.129817</td>
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<td>-0.051189</td>
<td>-0.271776</td>
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<th>-0.283908</th>
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<td>-0.132656</td>
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<td>-0.133703</td>
<td>-0.127417</td>
<td>...</td>
<td>-0.131702</td>
<td>-0.143818</td>
<td>-0.114336</td>
<td>-0.150598</td>
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<td>-0.130920</td>
<td>-0.131971</td>
</tr>
</tbody>
</table>
Expand Down Expand Up @@ -833,7 +833,7 @@ <h3>Custom colors and legend<a class="headerlink" href="#custom-colors-and-legen
</div>
</div>
<div class="cell_output docutils container">
<img alt="../../_images/6e23bd5c0905f5251324a019d02d83f882aa898484850f240301fb08a8730a30.png" src="../../_images/6e23bd5c0905f5251324a019d02d83f882aa898484850f240301fb08a8730a30.png" />
<img alt="../../_images/6739e976dd9f4e46bb439ceef2d025c6439450ab583c86d95a55bb1d69e7dfcc.png" src="../../_images/6739e976dd9f4e46bb439ceef2d025c6439450ab583c86d95a55bb1d69e7dfcc.png" />
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