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Forage fish mortality estimation using a size spectrum model

Code for the paper Jacobsen, N. S., Thorson, J. T., and Essington, T. E. 2018. Detecting mortality variation to enhance forage fish population assessments. ICES Journal of Marine Science, 76: 124–135.

Run the files 'baserun_model_X' for the four different models presented in the paper.

the folder 'sprat' contains code to calculate the time varying natural mortality for North Sea sprat.

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Code for forage fish mortality estimation paper

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