chore: requirement updates

[rayzhou-bit]

Ran the following commands locally:
make upgrade
make test

make upgrade updated the various requirements to the latest version. This introduced various errors and warnings when running make test.

I corrected the following pylint errors and warnings:
E0015 (unrecognized-option)
W0012 (unknown-option-value)
R0022 (useless-option-value)
C3001 (unnecessary-lambda-assignment)
E4702 (modified-iterating-dict)

[connorhaugh]

Can you inform as to what you did to verify these upgrades?

[rayzhou-bit]

I ran make upgrade locally which seems to be what the CI was trying to do. It's not passing for tests right now though. Trying to figure this out.

[bszabo]

Could you please enter a comment in this PR that documents which dependency's change you're responding to, what the nature of the breaking change was, and your general approach to resolving it? If the issue is that pylint became more picky about what constitutes "good python," then perhaps a comment about what types of expressions are no longer OK.

[rayzhou-bit]

@bszabo I believe everything that broke was related to pylint. I went through the test/lint errors one by one. A large number of the them were deprecated options. For other errors, I modeled code changes after examples in pylint documentation, such as https://pylint.pycqa.org/en/latest/user_guide/messages/convention/unnecessary-lambda-assignment.html . I could have had them ignored, but it feels like it would be better to update.