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    • phylogram

      Public
      minimal package for plotting dendritic morphologies
      Jupyter Notebook
      0000Updated Dec 3, 2024Dec 3, 2024
    • Java
      2025Updated Nov 11, 2024Nov 11, 2024
    • Arduino Code and Debugging Tools for behaviorMate
      C++
      0001Updated Aug 15, 2024Aug 15, 2024
    • A repository for electronics and hardware design files for a single-cell electroporation rig.
      GNU General Public License v3.0
      0200Updated Jul 1, 2024Jul 1, 2024
    • Code pertaining to Liao et al. Nature Neuroscience 2024
      Python
      1110Updated Jun 8, 2024Jun 8, 2024
    • Hardware

      Public
      Includes AutoDesk Inventor projects used for lab rigs and other miscellaneous CAD files.
      GNU General Public License v3.0
      0000Updated Mar 20, 2024Mar 20, 2024
    • vrMate

      Public
      A Unity application for rendering visual scenes. This is the companion application to behaviorMate that enables VR contexts..
      C#
      GNU General Public License v3.0
      0000Updated Nov 21, 2023Nov 21, 2023
    • Data and analysis code for Vancura*, Geiller* et al. Nat. Neurosci. 2023
      Jupyter Notebook
      MIT License
      0000Updated Feb 6, 2023Feb 6, 2023
    • Replay analysis code for Grosmark et al. 2021
      MATLAB
      0300Updated Jul 20, 2022Jul 20, 2022
    • MATLAB
      0000Updated Sep 26, 2021Sep 26, 2021
    • Python
      1100Updated Oct 30, 2020Oct 30, 2020
    • Python
      1100Updated Aug 25, 2020Aug 25, 2020
    • sima

      Public
      Python package for analysis of dynamic fluorescence microscopy data
      Python
      GNU General Public License v2.0
      50100342Updated Mar 14, 2019Mar 14, 2019
    • Analysis code for Zaremba et al. Nat. Neurosci. 2017.
      Python
      MIT License
      5100Updated Oct 15, 2017Oct 15, 2017
    • roibuddy

      Public
      SIMA ROI Editing and Registration Tool
      Python
      GNU General Public License v2.0
      129122Updated Feb 10, 2017Feb 10, 2017