update tests for changes to pytest #820

kecnry · 2024-01-20T13:56:40Z

opened on behalf of @aprsa

The new pytest version raises an error instead of warning when tests return a value, and when assert is used incorrectly. All tests have been touched up to not have issues with the latest pytest.

f-string format f'{var=}' has been introduced in python 3.8, and it caused the 3.7 tests to fail. This fixes that issue.

kecnry

A little difficult to tease out the needed changes from everything else here, but I think everything looks reasonable. Just one general concern about removing the bundle returns since that has been helpful to debug failing tests in the past.

kecnry · 2024-01-23T13:49:00Z

tests/tests/test_backward_compatibility/test_import.py

@@ -101,7 +97,6 @@ def test_21(verbose=False, plot=False):
    if plot:
        b.plot(show=True, time=0)

-    return b


are these intentionally removed (in several places throughout this PR)? They can be useful when running the script directly and debugging the bundle. If we do need to remove these, then the calls in __main__ need to be updated as well.

(turns out this is necessary otherwise pytest yells, so we'll just need to manually make these edits if we need to inspect the bundle to debug a broken test).

Yep, pytest currently raises a warning but the next version will raise an error whenever tests return anything. So we can't put those back in, unfortunately. See here for details.

kecnry · 2024-01-23T13:54:38Z

tests/tests/test_misaligned/test_misaligned_area_volume.py

-  theta = 0.9
-  area0 = 0.1554255703973858
-  volume0 = 5.7617852701434746e-03
+    # detacted case (only meaningful)


while we're changing other things 😝

Suggested change

# detacted case (only meaningful)

# detatched case (only meaningful)

@kecnry

* Import from within source tree overly restrictive (#819) In order to avoid same-name module conflicts with the system module (such as io.py), phoebe shouldn't be imported from its own source tree. The original test eliminated the entire package tree, including all auxiliary directories, which is overly restrictive and it prevented pytest from running when phoebe was installed with `pip -e`. This PR fixes that by blocking imports from the root directory and from the root/phoebe tree (the actual sources). Closes #806. * update tests for changes to pytest (#820) * Fixing up all pytests The new pytest version raises an error instead of warning when tests return a value, and when assert is used incorrectly. All tests have been touched up to not have issues with the latest pytest. * Update f-string to be compatible with python 3.7 f-string format f'{var=}' has been introduced in python 3.8, and it caused the 3.7 tests to fail. This fixes that issue. --------- Co-authored-by: Andrej Prsa <[email protected]> * Dynamical RVs now avoid meshing (#823) * Dynamical RVs now avoid meshing Calling b.compute_pblums() built the mesh and treated dynamical RVs as mesh-dependent. This fixes that for both run_compute() and for direct compute_pblums(), compute_l3(), and compute_ld_coeffs bundle methods. A new function, b._datasets_that_require_meshing(), filters datasets that require a mesh, i.e. 'lc', 'lp' and flux-weighted 'rv'. Closes #812. * Generalized dataset filtering with b._datasets_where() * Adding backend exception to mesh computation Even if phoebe backend didn't need meshes for a particular dataset, other backends do. This is now handled in the `_datasets_where()` function. --------- Co-authored-by: Kyle Conroy <[email protected]> * run_checks_compute() bugfix (#837) * run_checks_compute() bugfix The run_checks_compute() function included the internal "_default" compute parameter set in checking the ck2004 model atmosphere table existence in the passband files. This caused the checks to fail even if ck2004 was never needed. * Incorporating @kecnry's comments into the PR (along with additional comments) * Fixing the if statement per @kecnry's instructions. * Fix treatment of distance for alternate backends (#832) * regression test * don't duplicate distance handling for alt backends * temporarily skip jktebop * use top-level default_binary in test * version and changelog for 2.4.13 release * update setup-python to v5 to avoid deprecation warning --------- Co-authored-by: Andrej Prsa <[email protected]> Co-authored-by: Andrej Prsa <[email protected]>

@kecnry

* Import from within source tree overly restrictive (#819) In order to avoid same-name module conflicts with the system module (such as io.py), phoebe shouldn't be imported from its own source tree. The original test eliminated the entire package tree, including all auxiliary directories, which is overly restrictive and it prevented pytest from running when phoebe was installed with `pip -e`. This PR fixes that by blocking imports from the root directory and from the root/phoebe tree (the actual sources). Closes #806. * update tests for changes to pytest (#820) * Fixing up all pytests The new pytest version raises an error instead of warning when tests return a value, and when assert is used incorrectly. All tests have been touched up to not have issues with the latest pytest. * Update f-string to be compatible with python 3.7 f-string format f'{var=}' has been introduced in python 3.8, and it caused the 3.7 tests to fail. This fixes that issue. --------- Co-authored-by: Andrej Prsa <[email protected]> * Dynamical RVs now avoid meshing (#823) * Dynamical RVs now avoid meshing Calling b.compute_pblums() built the mesh and treated dynamical RVs as mesh-dependent. This fixes that for both run_compute() and for direct compute_pblums(), compute_l3(), and compute_ld_coeffs bundle methods. A new function, b._datasets_that_require_meshing(), filters datasets that require a mesh, i.e. 'lc', 'lp' and flux-weighted 'rv'. Closes #812. * Generalized dataset filtering with b._datasets_where() * Adding backend exception to mesh computation Even if phoebe backend didn't need meshes for a particular dataset, other backends do. This is now handled in the `_datasets_where()` function. --------- Co-authored-by: Kyle Conroy <[email protected]> * run_checks_compute() bugfix (#837) * run_checks_compute() bugfix The run_checks_compute() function included the internal "_default" compute parameter set in checking the ck2004 model atmosphere table existence in the passband files. This caused the checks to fail even if ck2004 was never needed. * Incorporating @kecnry's comments into the PR (along with additional comments) * Fixing the if statement per @kecnry's instructions. * Fix treatment of distance for alternate backends (#832) * regression test * don't duplicate distance handling for alt backends * temporarily skip jktebop * use top-level default_binary in test * version and changelog for 2.4.13 release * update setup-python to v5 to avoid deprecation warning --------- Co-authored-by: Andrej Prsa <[email protected]> Co-authored-by: Andrej Prsa <[email protected]>

@kecnry

* Import from within source tree overly restrictive (#819) In order to avoid same-name module conflicts with the system module (such as io.py), phoebe shouldn't be imported from its own source tree. The original test eliminated the entire package tree, including all auxiliary directories, which is overly restrictive and it prevented pytest from running when phoebe was installed with `pip -e`. This PR fixes that by blocking imports from the root directory and from the root/phoebe tree (the actual sources). Closes #806. * update tests for changes to pytest (#820) * Fixing up all pytests The new pytest version raises an error instead of warning when tests return a value, and when assert is used incorrectly. All tests have been touched up to not have issues with the latest pytest. * Update f-string to be compatible with python 3.7 f-string format f'{var=}' has been introduced in python 3.8, and it caused the 3.7 tests to fail. This fixes that issue. --------- Co-authored-by: Andrej Prsa <[email protected]> * Dynamical RVs now avoid meshing (#823) * Dynamical RVs now avoid meshing Calling b.compute_pblums() built the mesh and treated dynamical RVs as mesh-dependent. This fixes that for both run_compute() and for direct compute_pblums(), compute_l3(), and compute_ld_coeffs bundle methods. A new function, b._datasets_that_require_meshing(), filters datasets that require a mesh, i.e. 'lc', 'lp' and flux-weighted 'rv'. Closes #812. * Generalized dataset filtering with b._datasets_where() * Adding backend exception to mesh computation Even if phoebe backend didn't need meshes for a particular dataset, other backends do. This is now handled in the `_datasets_where()` function. --------- Co-authored-by: Kyle Conroy <[email protected]> * run_checks_compute() bugfix (#837) * run_checks_compute() bugfix The run_checks_compute() function included the internal "_default" compute parameter set in checking the ck2004 model atmosphere table existence in the passband files. This caused the checks to fail even if ck2004 was never needed. * Incorporating @kecnry's comments into the PR (along with additional comments) * Fixing the if statement per @kecnry's instructions. * Fix treatment of distance for alternate backends (#832) * regression test * don't duplicate distance handling for alt backends * temporarily skip jktebop * use top-level default_binary in test * version and changelog for 2.4.13 release * update setup-python to v5 to avoid deprecation warning --------- Co-authored-by: Andrej Prsa <[email protected]> Co-authored-by: Andrej Prsa <[email protected]>

aprsa added 2 commits January 19, 2024 16:41

Fixing up all pytests

04f5327

The new pytest version raises an error instead of warning when tests return a value, and when assert is used incorrectly. All tests have been touched up to not have issues with the latest pytest.

Update f-string to be compatible with python 3.7

53027d9

f-string format f'{var=}' has been introduced in python 3.8, and it caused the 3.7 tests to fail. This fixes that issue.

kecnry commented Jan 23, 2024

View reviewed changes

kecnry merged commit 4fdecc1 into phoebe-project:bugfix-2.4.13 Jan 23, 2024
10 checks passed

kecnry deleted the fix-pytest branch January 23, 2024 14:50

kecnry mentioned this pull request Mar 28, 2024

2.4.13 bugfix release #838

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update tests for changes to pytest #820

update tests for changes to pytest #820

kecnry commented Jan 20, 2024

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kecnry Jan 23, 2024

kecnry Jan 23, 2024

aprsa Jan 23, 2024 •

edited

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kecnry Jan 23, 2024

	# detacted case (only meaningful)
	# detatched case (only meaningful)

update tests for changes to pytest #820

update tests for changes to pytest #820

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aprsa Jan 23, 2024 •

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