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[MRG] update documentation & add notebooks to docs #631

Merged
merged 25 commits into from
Mar 7, 2019
Merged

[MRG] update documentation & add notebooks to docs #631

merged 25 commits into from
Mar 7, 2019

Commits on Jan 7, 2019

  1. remove out of date notebooks

    @ctb
    ctb committed Jan 7, 2019
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  2. remove outdated scripts

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    ctb committed Jan 7, 2019
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  3. Merge branch 'rm/notebooks' of /tmp/sourmash into rm/outdated

    @ctb
    ctb committed Jan 7, 2019
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Commits on Jan 14, 2019

  1. configure nbsphinx and add a test notebook

    @ctb
    ctb committed Jan 14, 2019
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  2. add nbsphinx to reqs

    @ctb
    ctb committed Jan 14, 2019
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Commits on Feb 17, 2019

  1. add 2019-upr-kmers notebooks and example files

    @ctb
    ctb committed Feb 17, 2019
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  2. Merge remote-tracking branch 'origin/master' into add/nbsphinx

    @ctb
    ctb committed Feb 17, 2019
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  3. add/update notebooks

    @ctb
    ctb committed Feb 17, 2019
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  4. add binder configuration

    @ctb
    ctb committed Feb 17, 2019
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  5. remove dockerfile

    @ctb
    ctb committed Feb 17, 2019
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  6. update notebooks, link into documentation

    @ctb
    ctb committed Feb 17, 2019
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Commits on Feb 18, 2019

  1. fix formatting issue that looks like a typo

    @ctb
    ctb committed Feb 18, 2019
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Commits on Feb 23, 2019

  1. update basic sourmash tutorial commands to work, mostly

    @ctb
    ctb committed Feb 23, 2019
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  2. fix sourmash_databases link

    @ctb
    ctb committed Feb 23, 2019
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  3. updated tutorials

    @ctb
    ctb committed Feb 23, 2019
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  4. fix spacing

    @ctb
    ctb committed Feb 23, 2019
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  5. significant documentation reorganization and (hopefully) simplification

    @ctb
    ctb committed Feb 23, 2019
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  6. add tutorial master index back in

    @ctb
    ctb committed Feb 23, 2019
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  7. add dashing and hulk refs

    @ctb
    ctb committed Feb 23, 2019
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  8. add bigsi

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    ctb committed Feb 23, 2019
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  9. Merge branch 'rm/outdated' into add/nbsphinx

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    ctb committed Feb 23, 2019
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  10. fix branch reference for notebook so that it works

    @ctb
    ctb committed Feb 23, 2019
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Commits on Mar 3, 2019

  1. update notebook with signature recalculation

    @ctb
    ctb committed Mar 3, 2019
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Commits on Mar 6, 2019

  1. fix order of bioconda channels

    @ctb
    ctb committed Mar 6, 2019
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Commits on Mar 7, 2019

  1. fix URLs

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    ctb committed Mar 7, 2019
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