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[FEATURE] Display QC metrics of var #239 #323

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merged 6 commits into from
Feb 28, 2022

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Imipenem
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@Imipenem Imipenem commented Feb 26, 2022

PR Checklist

  • This comment contains a description of changes (with reason)
  • Referenced issue is linked
  • Documentation in docs is updated

Description of changes

  • display qc metrics of var with extra columns if wanted

  • updated docs

@Zethson : are the QC metrics of var (the metric names) fixed or can they vary throughout different datasets? Cause currently the implementation just take every column in var and displays them, but that's not the desired behaviour!

- display qc metrics of var

- obs might be too big to actually display
@github-actions github-actions bot added the enhancement New feature or request label Feb 26, 2022
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Zethson commented Feb 26, 2022

"are the QC metrics of var (the metric names) fixed or can they vary throughout different datasets? Cause currently the implementation just take every column in var and displays them, but that's not the desired behaviour!"

Fixed so far, but maybe add a parameter to add additional columns for the display because people can add custom ones?

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Fixed so far, but maybe add a parameter to add additional columns for the display because people can add custom ones?

Way to go for now, y

@Imipenem Imipenem linked an issue Feb 26, 2022 that may be closed by this pull request
- display qc metrics of var with extra columns if wanted

- updated docs
@Imipenem Imipenem marked this pull request as ready for review February 27, 2022 11:05
@Imipenem Imipenem requested a review from Zethson February 27, 2022 11:05
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LGTM, but maybe we can move things around?

docs/usage/api.rst Outdated Show resolved Hide resolved
@Imipenem Imipenem requested a review from Zethson February 28, 2022 18:37
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LGTM

ehrapy/plot/ehrapy_plot/plot_qc.py Show resolved Hide resolved
@Zethson Zethson merged commit f801077 into development Feb 28, 2022
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Visualize QC metrics in a nice Rich table
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