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103 Open 30 Closed
103 Open 30 Closed
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Issues list

cd-hit-2d excluding from clusters good aligments
#146 opened May 14, 2024 by Tiltedkid
Sort fasta by cluster size not working
#145 opened Apr 28, 2024 by kgun12
Running Cd Hit is slow
#144 opened Mar 24, 2024 by mdMoinuddinSheam
s option for sequence overlapping threshold picking up wrong cut-off values
#143 opened Mar 6, 2024 by yuqiwangcbcb
Comparing sequences from 0 to 0!help!
#142 opened Dec 21, 2023 by Eager144000
3
unknown warning when installing cd-hit, issue?
#141 opened Oct 13, 2023 by Robvh-git
1
cd-hit installation
#140 opened Sep 10, 2023 by fa-rahimzadeh
1
cd-hit-dup Segmentation fault (core dumped)
#139 opened Aug 23, 2023 by scross92
5
clstr2txt.pl
#138 opened May 18, 2023 by SaidaSaad
bash: cd-hit: command not found...
#137 opened Mar 10, 2023 by zhenyaliu77
3
How to dealing with big gene dataset?
#136 opened Jan 26, 2023 by B-1991-ing
4
What is the bandwidth option?
#135 opened Jan 17, 2023 by alexzord
cd-hit-est -d description length option not working
#134 opened Dec 1, 2022 by Vicbuz
1
problem with maximum allowed sequences lengths
#133 opened Nov 16, 2022 by Valentin-Bio-zz
How can cd-hit-est-2d allow 80% cutoff
#131 opened Sep 20, 2022 by luhan125
print alignment -p 1 not work
#130 opened Sep 1, 2022 by jianshu93
How to reset MAX_SEQ
#129 opened Jun 20, 2022 by timeresistance1996
3
Problems during running PSI-CD-HIT:Name "main::bl_dir" used only once: possible typo at ./psi-cd-hit.pl line 103.
#128 opened May 18, 2022 by AL-Yan
5
Where is psi-cd-hit?
#127 opened Apr 12, 2022 by iquasere
FATAL docker build error
#126 opened Mar 16, 2022 by steph-birnbaum
1
Option to save and reload index table
#125 opened Dec 8, 2021 by sysimm
*** Error in `cd-hit-est': corrupted double-linked list: 0x0000559009582520 ***
#124 opened Dec 5, 2021 by SebasSaenz
What does CD-HIT-EST representative sequence mean?
#123 opened Dec 1, 2021 by Rob-murphys
error after making max-seq 1000000
#122 opened Nov 27, 2021 by Ahmedbargheet
1
Error during running CD-HIT
#121 opened Nov 25, 2021 by Ahmedbargheet
ProTip! Exclude everything labeled bug with -label:bug.