Update dependencies

dwi_ml/data/processing/streamlines/post_processing.py

@@ -8,7 +8,7 @@
 from matplotlib.colors import LogNorm
 from mpl_toolkits.axes_grid1 import make_axes_locatable
 
-from scilpy.tractanalysis.tools import \
+from scilpy.tractanalysis.connectivity_segmentation import \
     extract_longest_segments_from_profile as segmenting_func
 from scilpy.tractograms.uncompress import uncompress
 

pyproject.toml

@@ -0,0 +1,7 @@
+# Minimal build configuration at detailed here:
+# https://github.com/pypa/pip/issues/11457
+
+[build-system]
+requires = [
+    "setuptools >= 64"
+]

requirements.txt

@@ -8,7 +8,7 @@
 # -------
 requests==2.28.*
 dipy==1.9.*
-scilpy==2.0.2
+-e git+https://github.com/scilus/scilpy@24435143c507ca018dd7edf3447fd18004c62077#egg=scilpy
 
 # -------
 # Other important dependencies
@@ -28,9 +28,9 @@ pynvml>=11.5.0
 # Necessary but should be installed with scilpy (Last check: 04/2024):
 # -------
 future==0.18.*
-h5py==3.7.*   # h5py must absolutely be >2.4: that's when it became thread-safe
+h5py==3.10.*   # h5py must absolutely be >2.4: that's when it became thread-safe
 matplotlib==3.6.*   # Hint: If matplotlib fails, you may try to install pyQt5.
 nibabel==5.2.*
-numpy==1.23.*
-scipy==1.9.*
+numpy==1.25.*
+scipy==1.11.*
 scikit-image==0.22.*

setup.py

@@ -34,7 +34,6 @@
             version=VERSION,
             packages=find_packages(),
             python_requires=PYTHON_VERSION,
-            setup_requires=['numpy'],
             install_requires=external_dependencies,
             entry_points={
                 'console_scripts': ["{}=scripts_python.{}:main".format(